Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG2110
Protein list: lists the 16 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.
Description
| Description | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain |
|---|---|
| Function(s) descr. | Translation, ribosomal structure and biogenesis (J) |
Occurence in the database
| COG2110 is associated with 16 different proteins |
| The 16 proteins are classified into 3 different orthogroup(s) |
| Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism | |
|---|---|---|---|---|---|---|---|---|
| 0 | group_3277 | FBDBKF_08045 | 144779 | 145699 | 1 | Macro domain | Morganella morganii S1 | |
| 1 | group_3422 | FBDBKF_14015 | 101006 | 101176 | 1 | Macro domain-containing protein | Morganella morganii S1 | |
| 2 | group_2940 | FBDBKF_14020 | 101194 | 101904 | 1 | macro domain-containing protein | Morganella morganii S1 | |
| 3 | group_3422 | EHELCC_11690 | 185882 | 186052 | 1 | Macro domain-containing protein | Morganella morganii S2 | |
| 4 | group_2940 | EHELCC_11695 | 186070 | 186780 | 1 | macro domain-containing protein | Morganella morganii S2 | |
| 5 | group_3277 | EHELCC_13875 | 119084 | 119893 | 1 | Macro domain | Morganella morganii S2 | |
| 6 | group_3422 | NLDBIP_12030 | 185882 | 186052 | 1 | Macro domain-containing protein | Morganella morganii S4 | |
| 7 | group_2940 | NLDBIP_12035 | 186070 | 186780 | 1 | macro domain-containing protein | Morganella morganii S4 | |
| 8 | group_3277 | NLDBIP_14320 | 139848 | 140768 | 1 | Macro domain | Morganella morganii S4 | |
| 9 | group_3277 | LHKJJB_08530 | 18981 | 19901 | -1 | Macro domain | Morganella morganii S3 | |
| 10 | group_3422 | LHKJJB_11890 | 185882 | 186052 | 1 | Macro domain-containing protein | Morganella morganii S3 | |
| 11 | group_2940 | LHKJJB_11895 | 186070 | 186780 | 1 | macro domain-containing protein | Morganella morganii S3 | |
| 12 | group_3277 | HKOGLL_08080 | 18981 | 19874 | -1 | Macro domain-containing protein | Morganella morganii S5 | |
| 13 | group_3422 | HKOGLL_10505 | 185882 | 186052 | 1 | Macro domain-containing protein | Morganella morganii S5 | |
| 14 | group_2940 | HKOGLL_10510 | 186070 | 186780 | 1 | macro domain-containing protein | Morganella morganii S5 | |
| 15 | group_2940 | F4V73_RS12870 | 178968 | 179936 | 1 | macro domain-containing protein | Morganella psychrotolerans |
