COG2110


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2110, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 16 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain
Function(s) descr. Translation, ribosomal structure and biogenesis (J)

Occurence in the database

COG2110 is associated with 16 different proteins (see tab "Protein list" and "Profile")
The 16 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3276 FBDBKF_08045 144779 145699 1 Macro domain Morganella morganii S1
1 group_3426 FBDBKF_14015 101006 101176 1 Macro domain-containing protein Morganella morganii S1
2 group_2925 FBDBKF_14020 101194 101904 1 macro domain-containing protein Morganella morganii S1
3 group_3426 EHELCC_11690 185882 186052 1 Macro domain-containing protein Morganella morganii S2
4 group_2925 EHELCC_11695 186070 186780 1 macro domain-containing protein Morganella morganii S2
5 group_3276 EHELCC_13875 119084 119893 1 Macro domain Morganella morganii S2
6 group_3426 NLDBIP_12030 185882 186052 1 Macro domain-containing protein Morganella morganii S4
7 group_2925 NLDBIP_12035 186070 186780 1 macro domain-containing protein Morganella morganii S4
8 group_3276 NLDBIP_14320 139848 140768 1 Macro domain Morganella morganii S4
9 group_3276 LHKJJB_08530 18981 19901 -1 Macro domain Morganella morganii S3
10 group_3426 LHKJJB_11890 185882 186052 1 Macro domain-containing protein Morganella morganii S3
11 group_2925 LHKJJB_11895 186070 186780 1 macro domain-containing protein Morganella morganii S3
12 group_3276 HKOGLL_08080 18981 19874 -1 Macro domain-containing protein Morganella morganii S5
13 group_3426 HKOGLL_10505 185882 186052 1 Macro domain-containing protein Morganella morganii S5
14 group_2925 HKOGLL_10510 186070 186780 1 macro domain-containing protein Morganella morganii S5
15 group_2925 F4V73_RS12870 178968 179936 1 macro domain-containing protein Morganella psychrotolerans