COG1918


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1918, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Fe2+ transport protein FeoA
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG1918 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1628 FBDBKF_10725 112487 112714 -1 feoA ferrous iron transporter A Morganella morganii S1
1 group_1628 EHELCC_15060 112477 112704 -1 feoA ferrous iron transporter A Morganella morganii S2
2 group_1628 NLDBIP_14890 112477 112704 -1 feoA ferrous iron transporter A Morganella morganii S4
3 group_1628 LHKJJB_14455 29022 29249 1 feoA ferrous iron transporter A Morganella morganii S3
4 group_1628 HKOGLL_13075 29022 29249 1 feoA ferrous iron transporter A Morganella morganii S5
5 group_1628 F4V73_RS14440 116198 116425 -1 feoA ferrous iron transporter A Morganella psychrotolerans
6 group_1628 PMI_RS14435 3203509 3203745 1 feoA ferrous iron transporter A Proteus mirabilis HI4320