COG1845


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1845, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Heme/copper-type cytochrome/quinol oxidase, subunit 3
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG1845 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2103 FBDBKF_15830 15226 15840 -1 cyoC cytochrome o ubiquinol oxidase subunit III Morganella morganii S1
1 group_2103 EHELCC_18430 2665 3279 -1 cyoC cytochrome o ubiquinol oxidase subunit III Morganella morganii S2
2 group_2103 NLDBIP_17265 2665 3279 -1 cyoC cytochrome o ubiquinol oxidase subunit III Morganella morganii S4
3 group_2103 LHKJJB_17395 52909 53523 1 cyoC cytochrome o ubiquinol oxidase subunit III Morganella morganii S3
4 group_2103 HKOGLL_17000 2665 3279 -1 cyoC cytochrome o ubiquinol oxidase subunit III Morganella morganii S5
5 group_2103 F4V73_RS16480 115836 116450 1 cytochrome o ubiquinol oxidase subunit III Morganella psychrotolerans
6 group_2103 PMI_RS00510 131683 132294 -1 cytochrome o ubiquinol oxidase subunit III Proteus mirabilis HI4320