COG1792


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1792, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Cell shape-determining protein MreC
Function(s) descr. Cell cycle control, cell division, chromosome partitioning (D)
Cytoskeleton (Z)

Occurence in the database

COG1792 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_751 FBDBKF_03345 70103 71224 -1 mreC rod shape-determining protein MreC Morganella morganii S1
1 group_751 EHELCC_07190 175879 177000 1 mreC rod shape-determining protein MreC Morganella morganii S2
2 group_751 NLDBIP_07515 175752 176873 1 mreC rod shape-determining protein MreC Morganella morganii S4
3 group_751 LHKJJB_07050 139498 140619 1 mreC rod shape-determining protein MreC Morganella morganii S3
4 group_751 HKOGLL_03880 92768 93889 -1 mreC rod shape-determining protein MreC Morganella morganii S5
5 group_751 F4V73_RS11590 468528 469658 1 mreC rod shape-determining protein MreC Morganella psychrotolerans
6 group_751 PMI_RS18070 3969614 3970660 1 mreC rod shape-determining protein MreC Proteus mirabilis HI4320