COG1785


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1785, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Alkaline phosphatase
Function(s) descr. Inorganic ion transport and metabolism (P)
General function prediction only (R)

Occurence in the database

COG1785 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2321 FBDBKF_17835 27442 28878 -1 phoA alkaline phosphatase Morganella morganii S1
1 group_2321 EHELCC_09860 206874 208310 -1 phoA alkaline phosphatase Morganella morganii S2
2 group_2321 NLDBIP_10240 206874 208310 -1 phoA alkaline phosphatase Morganella morganii S4
3 group_2321 LHKJJB_07515 8928 10364 1 phoA alkaline phosphatase Morganella morganii S3
4 group_2321 HKOGLL_07065 8928 10364 1 phoA alkaline phosphatase Morganella morganii S5
5 group_2321 F4V73_RS15130 6306 7742 1 phoA alkaline phosphatase Morganella psychrotolerans
6 group_2321 PMI_RS12355 2738069 2739508 -1 phoA alkaline phosphatase Proteus mirabilis HI4320