COG1739


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1739, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Putative translation regulator, IMPACT (imprinted ancient) protein family
Function(s) descr. General function prediction only (R)

Occurence in the database

COG1739 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2204 FBDBKF_16875 2188 2781 -1 yIH1 IMPACT family protein Morganella morganii S1
1 group_2204 EHELCC_19555 8677 9270 1 yIH1 IMPACT family protein Morganella morganii S2
2 group_2204 NLDBIP_16925 65729 66322 1 yIH1 IMPACT family protein Morganella morganii S4
3 group_2204 LHKJJB_16545 2188 2781 -1 yIH1 IMPACT family protein Morganella morganii S3
4 group_2204 HKOGLL_17510 2188 2781 -1 yIH1 IMPACT family protein Morganella morganii S5
5 group_2204 F4V73_RS18345 2306 2932 -1 IMPACT family protein Morganella psychrotolerans
6 group_2204 PMI_RS17650 3873787 3874407 1 IMPACT family protein Proteus mirabilis HI4320