COG1706


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1706, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Flagellar basal body P-ring protein FlgI
Function(s) descr. Cell motility (N)

Occurence in the database

COG1706 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_466 FBDBKF_00680 113908 115014 -1 flgI Flagellar basal body P-ring protein FlgI Morganella morganii S1
1 group_466 EHELCC_00865 193854 194960 1 flgI Flagellar basal body P-ring protein FlgI Morganella morganii S2
2 group_466 NLDBIP_02595 485176 486282 -1 flgI Flagellar basal body P-ring protein FlgI Morganella morganii S4
3 group_466 LHKJJB_04110 92417 93523 -1 flgI Flagellar basal body P-ring protein FlgI Morganella morganii S3
4 group_466 HKOGLL_02935 194059 195165 1 flgI Flagellar basal body P-ring protein FlgI Morganella morganii S5
5 group_466 F4V73_RS06690 1390737 1391843 -1 flagellar basal body P-ring protein FlgI Morganella psychrotolerans
6 group_466 PMI_RS08040 1758368 1759474 -1 flagellar basal body P-ring protein FlgI Proteus mirabilis HI4320