COG1684


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1684, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Flagellar biosynthesis protein FliR
Function(s) descr. Cell motility (N)

Occurence in the database

COG1684 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_462 FBDBKF_00650 107346 108131 1 fliR flagellar biosynthetic protein FliR Morganella morganii S1
1 group_462 EHELCC_00895 200737 201522 -1 fliR flagellar biosynthetic protein FliR Morganella morganii S2
2 group_462 NLDBIP_02565 478614 479399 1 fliR flagellar biosynthetic protein FliR Morganella morganii S4
3 group_462 LHKJJB_04080 85855 86640 1 fliR flagellar biosynthetic protein FliR Morganella morganii S3
4 group_462 HKOGLL_02965 200942 201727 -1 fliR flagellar biosynthetic protein FliR Morganella morganii S5
5 group_462 F4V73_RS06660 1384229 1385011 1 fliR flagellar biosynthetic protein FliR Morganella psychrotolerans
6 group_462 PMI_RS08020 1753555 1754337 1 fliR flagellar biosynthetic protein FliR Proteus mirabilis HI4320