COG1663


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1663, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Tetraacyldisaccharide-1-P 4'-kinase (Lipid A 4'-kinase)
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)

Occurence in the database

COG1663 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1233 FBDBKF_07180 110719 111702 1 lpxK tetraacyldisaccharide 4'-kinase Morganella morganii S1
1 group_1233 EHELCC_03790 74484 75467 -1 lpxK tetraacyldisaccharide 4'-kinase Morganella morganii S2
2 group_1233 NLDBIP_03790 74280 75263 -1 lpxK tetraacyldisaccharide 4'-kinase Morganella morganii S4
3 group_1233 LHKJJB_09620 74394 75377 -1 lpxK tetraacyldisaccharide 4'-kinase Morganella morganii S3
4 group_1233 HKOGLL_09355 115675 116658 1 lpxK tetraacyldisaccharide 4'-kinase Morganella morganii S5
5 group_1233 F4V73_RS01365 298906 299949 1 lpxK tetraacyldisaccharide 4'-kinase Morganella psychrotolerans
6 group_1233 PMI_RS03535 790313 791314 1 lpxK tetraacyldisaccharide 4'-kinase Proteus mirabilis HI4320