COG1536


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1536, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Flagellar motor switch protein FliG
Function(s) descr. Cell motility (N)

Occurence in the database

COG1536 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_452 FBDBKF_00595 98854 99846 1 fliG flagellar motor switch protein FliG Morganella morganii S1
1 group_452 EHELCC_00950 209022 210014 -1 fliG flagellar motor switch protein FliG Morganella morganii S2
2 group_452 NLDBIP_02510 470122 471114 1 fliG flagellar motor switch protein FliG Morganella morganii S4
3 group_452 LHKJJB_04025 77363 78355 1 fliG flagellar motor switch protein FliG Morganella morganii S3
4 group_452 HKOGLL_03020 209227 210219 -1 fliG flagellar motor switch protein FliG Morganella morganii S5
5 group_452 F4V73_RS06605 1375771 1376763 1 fliG flagellar motor switch protein FliG Morganella psychrotolerans
6 group_452 PMI_RS07965 1744970 1745968 1 fliG flagellar motor switch protein FliG Proteus mirabilis HI4320