COG1301


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1301, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Na+/H+-dicarboxylate symporter
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG1301 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_88 FBDBKF_07495 11823 13118 1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S1
1 group_88 FBDBKF_18790 4115 5413 1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S1
2 group_88 EHELCC_16985 4116 5414 1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S2
3 group_88 EHELCC_17165 39473 40768 1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S2
4 group_88 NLDBIP_13770 6892 8187 1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S4
5 group_88 NLDBIP_18365 4115 5413 1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S4
6 group_88 LHKJJB_09080 151562 152857 -1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S3
7 group_88 LHKJJB_09260 186916 188214 -1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S3
8 group_88 HKOGLL_08630 151562 152857 -1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S5
9 group_88 HKOGLL_08810 186916 188214 -1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S5
10 group_88 F4V73_RS13620 358734 360026 -1 dicarboxylate/amino acid:cation symporter Morganella psychrotolerans
11 group_88 F4V73_RS13805 394654 395967 -1 dicarboxylate/amino acid:cation symporter Morganella psychrotolerans