COG1295


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1295, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)
Function(s) descr. Function unknown (S)

Occurence in the database

COG1295 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1713 FBDBKF_11945 37332 38324 1 yhjD inner membrane protein YhjD Morganella morganii S1
1 group_1713 EHELCC_14360 96381 97373 -1 yhjD inner membrane protein YhjD Morganella morganii S2
2 group_1713 NLDBIP_15455 100318 101310 -1 yhjD inner membrane protein YhjD Morganella morganii S4
3 group_1713 LHKJJB_15155 37332 38324 1 yhjD inner membrane protein YhjD Morganella morganii S3
4 group_1713 HKOGLL_14275 23995 24987 1 yhjD inner membrane protein YhjD Morganella morganii S5
5 group_1713 F4V73_RS14710 178317 179321 -1 yhjD inner membrane protein YhjD Morganella psychrotolerans
6 group_1713 PMI_RS14020 3112582 3113604 1 yhjD inner membrane protein YhjD Proteus mirabilis HI4320