COG1136


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1136, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 15 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type lipoprotein export system, ATPase component
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)

Occurence in the database

COG1136 is associated with 15 different proteins (see tab "Protein list" and "Profile")
The 15 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1211 FBDBKF_07050 73583 75529 1 macB macrolide ABC transporter ATP-binding protein/permease MacB Morganella morganii S1
1 group_381 FBDBKF_14625 21573 22268 -1 lolD lipoprotein-releasing ABC transporter ATP-binding protein LolD Morganella morganii S1
2 group_1211 EHELCC_03920 110657 112603 -1 macB macrolide ABC transporter ATP-binding protein/permease MacB Morganella morganii S2
3 group_381 EHELCC_15430 51649 52344 -1 lolD lipoprotein-releasing ABC transporter ATP-binding protein LolD Morganella morganii S2
4 group_1211 NLDBIP_03920 110453 112399 -1 macB macrolide ABC transporter ATP-binding protein/permease MacB Morganella morganii S4
5 group_381 NLDBIP_15960 51649 52344 -1 lolD lipoprotein-releasing ABC transporter ATP-binding protein LolD Morganella morganii S4
6 group_1211 LHKJJB_09750 110567 112513 -1 macB macrolide ABC transporter ATP-binding protein/permease MacB Morganella morganii S3
7 group_381 LHKJJB_15880 64342 65037 1 lolD lipoprotein-releasing ABC transporter ATP-binding protein LolD Morganella morganii S3
8 group_1211 HKOGLL_09225 78539 80485 1 macB macrolide ABC transporter ATP-binding protein/permease MacB Morganella morganii S5
9 group_381 HKOGLL_15000 63554 64249 1 lolD lipoprotein-releasing ABC transporter ATP-binding protein LolD Morganella morganii S5
10 group_1211 F4V73_RS01235 261156 263102 1 macB macrolide ABC transporter ATP-binding protein/permease MacB Morganella psychrotolerans
11 group_381 F4V73_RS05115 1090853 1091554 -1 ABC transporter ATP-binding protein Morganella psychrotolerans
12 group_381 F4V73_RS07420 1549818 1550513 -1 lolD lipoprotein-releasing ABC transporter ATP-binding protein LolD Morganella psychrotolerans
13 group_1211 PMI_RS03380 746233 748176 1 macB macrolide ABC transporter ATP-binding protein/permease MacB Proteus mirabilis HI4320
14 group_381 PMI_RS04315 970096 970800 1 lolD lipoprotein-releasing ABC transporter ATP-binding protein LolD Proteus mirabilis HI4320