COG1126


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1126, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type polar amino acid transport system, ATPase component
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG1126 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_80 FBDBKF_00460 69315 70037 1 ehuA ABC-type polar amino acid transport system, ATPase component Morganella morganii S1
1 group_80 FBDBKF_10030 98936 99661 1 artP ABC-type polar amino acid transport system, ATPase component Morganella morganii S1
2 group_80 EHELCC_01085 238831 239553 -1 ehuA ABC-type polar amino acid transport system, ATPase component Morganella morganii S2
3 group_80 EHELCC_04830 290901 291626 1 artP ABC-type polar amino acid transport system, ATPase component Morganella morganii S2
4 group_80 NLDBIP_02375 440583 441305 1 ehuA ABC-type polar amino acid transport system, ATPase component Morganella morganii S4
5 group_80 NLDBIP_04830 290697 291422 1 artP ABC-type polar amino acid transport system, ATPase component Morganella morganii S4
6 group_80 LHKJJB_03890 47824 48546 1 ehuA ABC-type polar amino acid transport system, ATPase component Morganella morganii S3
7 group_80 LHKJJB_13800 43956 44681 -1 artP ABC-type polar amino acid transport system, ATPase component Morganella morganii S3
8 group_80 HKOGLL_03155 239036 239758 -1 ehuA ABC-type polar amino acid transport system, ATPase component Morganella morganii S5
9 group_80 HKOGLL_12735 99717 100442 1 artP ABC-type polar amino acid transport system, ATPase component Morganella morganii S5
10 group_80 F4V73_RS00305 72029 72754 -1 amino acid ABC transporter ATP-binding protein Morganella psychrotolerans
11 group_80 PMI_RS02140 502498 503223 -1 amino acid ABC transporter ATP-binding protein Proteus mirabilis HI4320