COG1119


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1119, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type molybdenum transport system, ATPase component ModF/photorepair protein PhrA
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG1119 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1500 FBDBKF_09680 34583 36034 1 modF molybdate ABC transporter ATP-binding protein ModF Morganella morganii S1
1 group_1500 EHELCC_04480 226548 227999 1 modF molybdate ABC transporter ATP-binding protein ModF Morganella morganii S2
2 group_1500 NLDBIP_04480 226344 227795 1 modF molybdate ABC transporter ATP-binding protein ModF Morganella morganii S4
3 group_1500 LHKJJB_14150 107583 109034 -1 modF molybdate ABC transporter ATP-binding protein ModF Morganella morganii S3
4 group_1500 HKOGLL_12385 35364 36815 1 modF molybdate ABC transporter ATP-binding protein ModF Morganella morganii S5
5 group_1500 F4V73_RS00660 136943 138394 -1 modF molybdate ABC transporter ATP-binding protein ModF Morganella psychrotolerans
6 group_1500 PMI_RS02915 638016 639482 -1 modF molybdate ABC transporter ATP-binding protein ModF Proteus mirabilis HI4320