Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG1076
Protein list: lists the 14 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.
Description
| Description | DnaJ domain-containing protein |
|---|---|
| Function(s) descr. | Posttranslational modification, protein turnover, chaperones (O) |
Occurence in the database
| COG1076 is associated with 14 different proteins |
| The 14 proteins are classified into 2 different orthogroup(s) |
| Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism | |
|---|---|---|---|---|---|---|---|---|
| 0 | group_600 | FBDBKF_01120 | 209360 | 209878 | -1 | hscB | co-chaperone HscB | Morganella morganii S1 |
| 1 | group_1160 | FBDBKF_06245 | 80793 | 81614 | -1 | djlA | co-chaperone DjlA | Morganella morganii S1 |
| 2 | group_600 | EHELCC_00425 | 98990 | 99508 | 1 | hscB | co-chaperone HscB | Morganella morganii S2 |
| 3 | group_1160 | EHELCC_09290 | 81365 | 82186 | -1 | djlA | co-chaperone DjlA | Morganella morganii S2 |
| 4 | group_600 | NLDBIP_03035 | 580628 | 581146 | -1 | hscB | co-chaperone HscB | Morganella morganii S4 |
| 5 | group_1160 | NLDBIP_09670 | 81365 | 82186 | -1 | djlA | co-chaperone DjlA | Morganella morganii S4 |
| 6 | group_600 | LHKJJB_04550 | 187869 | 188387 | -1 | hscB | co-chaperone HscB | Morganella morganii S3 |
| 7 | group_1160 | LHKJJB_08085 | 135052 | 135873 | 1 | djlA | co-chaperone DjlA | Morganella morganii S3 |
| 8 | group_600 | HKOGLL_02495 | 99195 | 99713 | 1 | hscB | co-chaperone HscB | Morganella morganii S5 |
| 9 | group_1160 | HKOGLL_07635 | 135052 | 135873 | 1 | djlA | co-chaperone DjlA | Morganella morganii S5 |
| 10 | group_600 | F4V73_RS07190 | 1497334 | 1497852 | -1 | hscB | co-chaperone HscB | Morganella psychrotolerans |
| 11 | group_1160 | F4V73_RS15675 | 132602 | 133420 | 1 | djlA | co-chaperone DjlA | Morganella psychrotolerans |
| 12 | group_600 | PMI_RS09165 | 1999446 | 1999967 | -1 | hscB | co-chaperone HscB | Proteus mirabilis HI4320 |
| 13 | group_1160 | PMI_RS11525 | 2541277 | 2542077 | -1 | djlA | co-chaperone DjlA | Proteus mirabilis HI4320 |
