COG0802


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0802, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description tRNA A37 threonylcarbamoyladenosine biosynthesis protein TsaE
Function(s) descr. Translation, ribosomal structure and biogenesis (J)

Occurence in the database

COG0802 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1361 FBDBKF_08435 66777 67241 1 tsaE tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE Morganella morganii S1
1 group_1361 EHELCC_13090 96484 96948 -1 tsaE tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE Morganella morganii S2
2 group_1361 NLDBIP_13430 96484 96948 -1 tsaE tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE Morganella morganii S4
3 group_1361 LHKJJB_13125 65495 65959 1 tsaE tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE Morganella morganii S3
4 group_1361 HKOGLL_11905 96484 96948 -1 tsaE tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE Morganella morganii S5
5 group_1361 F4V73_RS09655 32992 33456 1 tsaE tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE Morganella psychrotolerans
6 group_1361 PMI_RS16730 3687768 3688235 1 tsaE tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE Proteus mirabilis HI4320