COG0781


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0781, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Transcription antitermination protein NusB
Function(s) descr. Transcription (K)

Occurence in the database

COG0781 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2254 FBDBKF_17370 5655 6068 -1 nusB transcription antitermination factor NusB Morganella morganii S1
1 group_2254 EHELCC_17265 5655 6068 -1 nusB transcription antitermination factor NusB Morganella morganii S2
2 group_2254 NLDBIP_17930 36728 37141 1 nusB transcription antitermination factor NusB Morganella morganii S4
3 group_2254 LHKJJB_17850 36726 37139 1 nusB transcription antitermination factor NusB Morganella morganii S3
4 group_2254 HKOGLL_17860 36726 37139 1 nusB transcription antitermination factor NusB Morganella morganii S5
5 group_2254 F4V73_RS16545 129353 129769 -1 nusB transcription antitermination factor NusB Morganella psychrotolerans
6 group_2254 PMI_RS00400 111282 111695 1 nusB transcription antitermination factor NusB Proteus mirabilis HI4320