COG0716


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0716, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 20 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Flavodoxin
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG0716 is associated with 20 different proteins (see tab "Protein list" and "Profile")
The 20 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_818 FBDBKF_04105 6835 7353 1 fldB flavodoxin FldB Morganella morganii S1
1 group_1067 FBDBKF_06045 34903 35352 -1 fldA flavodoxin Morganella morganii S1
2 group_1532 FBDBKF_09900 75384 75914 1 fldA flavodoxin FldA Morganella morganii S1
3 group_1532 EHELCC_04700 267349 267879 1 fldA flavodoxin FldA Morganella morganii S2
4 group_818 EHELCC_05395 66292 66810 1 fldB flavodoxin FldB Morganella morganii S2
5 group_1067 EHELCC_09090 35475 35924 -1 fldA flavodoxin Morganella morganii S2
6 group_1532 NLDBIP_04700 267145 267675 1 fldA flavodoxin FldA Morganella morganii S4
7 group_818 NLDBIP_05715 107357 107875 1 fldB flavodoxin FldB Morganella morganii S4
8 group_1067 NLDBIP_09470 35475 35924 -1 fldA flavodoxin Morganella morganii S4
9 group_818 LHKJJB_02595 84881 85399 1 fldB flavodoxin FldB Morganella morganii S3
10 group_1067 LHKJJB_08285 181314 181763 1 fldA flavodoxin Morganella morganii S3
11 group_1532 LHKJJB_13930 67703 68233 -1 fldA flavodoxin FldA Morganella morganii S3
12 group_818 HKOGLL_06070 6745 7263 1 fldB flavodoxin FldB Morganella morganii S5
13 group_1067 HKOGLL_07835 181314 181763 1 fldA flavodoxin Morganella morganii S5
14 group_1532 HKOGLL_12605 76165 76695 1 fldA flavodoxin FldA Morganella morganii S5
15 group_1532 F4V73_RS00450 96703 97233 -1 fldA flavodoxin FldA Morganella psychrotolerans
16 group_818 F4V73_RS08545 1764841 1765359 1 fldB flavodoxin FldB Morganella psychrotolerans
17 group_1532 PMI_RS02680 586429 586956 -1 fldA flavodoxin FldA Proteus mirabilis HI4320
18 group_818 PMI_RS09925 2153477 2153995 1 fldB flavodoxin FldB Proteus mirabilis HI4320
19 group_1067 PMI_RS11310 2489934 2490377 -1 flavodoxin Proteus mirabilis HI4320