COG0680


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0680, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Ni,Fe-hydrogenase maturation factor
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG0680 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_788 FBDBKF_03695 142182 142673 -1 hycI hydrogenase maturation peptidase HycI Morganella morganii S1
1 group_2407 FBDBKF_19285 5512 6006 1 hybD HyaD/HybD family hydrogenase maturation endopeptidase Morganella morganii S1
2 group_788 EHELCC_06840 104430 104921 1 hycI hydrogenase maturation peptidase HycI Morganella morganii S2
3 group_2407 EHELCC_07570 252603 253097 1 hybD HyaD/HybD family hydrogenase maturation endopeptidase Morganella morganii S2
4 group_788 NLDBIP_07165 104303 104794 1 hycI hydrogenase maturation peptidase HycI Morganella morganii S4
5 group_2407 NLDBIP_07895 252476 252970 1 hybD HyaD/HybD family hydrogenase maturation endopeptidase Morganella morganii S4
6 group_788 LHKJJB_06700 68049 68540 1 hycI hydrogenase maturation peptidase HycI Morganella morganii S3
7 group_2407 LHKJJB_07430 216222 216716 1 hybD HyaD/HybD family hydrogenase maturation endopeptidase Morganella morganii S3
8 group_2407 HKOGLL_03500 16671 17165 -1 hybD HyaD/HybD family hydrogenase maturation endopeptidase Morganella morganii S5
9 group_788 HKOGLL_04230 164847 165338 -1 hycI hydrogenase maturation peptidase HycI Morganella morganii S5
10 group_788 F4V73_RS11175 374763 375263 1 hycI hydrogenase maturation peptidase HycI Morganella psychrotolerans
11 group_2407 F4V73_RS12045 564222 564716 1 HyaD/HybD family hydrogenase maturation endopeptidase Morganella psychrotolerans
12 group_2407 PMI_RS00170 58378 58866 1 HyaD/HybD family hydrogenase maturation endopeptidase Proteus mirabilis HI4320
13 group_788 PMI_RS12450 2761552 2762052 -1 hycI hydrogenase maturation peptidase HycI Proteus mirabilis HI4320