COG0673


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0673, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 19 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Predicted dehydrogenase
Function(s) descr. General function prediction only (R)

Occurence in the database

COG0673 is associated with 19 different proteins (see tab "Protein list" and "Profile")
The 19 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_924 FBDBKF_05020 9631 10671 -1 mviM putative dehydrogenase Morganella morganii S1
1 group_2697 FBDBKF_05650 137425 138351 -1 mviM putative dehydrogenase Morganella morganii S1
2 group_1292 FBDBKF_07865 101610 102569 1 lys9 diaminopimelate dehydrogenase Morganella morganii S1
3 group_2697 EHELCC_11940 43143 44069 1 mviM putative dehydrogenase Morganella morganii S2
4 group_924 EHELCC_12570 170823 171863 1 mviM putative dehydrogenase Morganella morganii S2
5 group_1292 EHELCC_13695 75804 76763 1 lys9 diaminopimelate dehydrogenase Morganella morganii S2
6 group_2697 NLDBIP_12280 43098 44024 1 mviM putative dehydrogenase Morganella morganii S4
7 group_924 NLDBIP_12910 170778 171818 1 mviM putative dehydrogenase Morganella morganii S4
8 group_1292 NLDBIP_14140 96679 97638 1 lys9 diaminopimelate dehydrogenase Morganella morganii S4
9 group_1292 LHKJJB_08710 62111 63070 -1 lys9 diaminopimelate dehydrogenase Morganella morganii S3
10 group_2697 LHKJJB_12140 43143 44069 1 mviM putative dehydrogenase Morganella morganii S3
11 group_924 LHKJJB_12770 170823 171863 1 mviM putative dehydrogenase Morganella morganii S3
12 group_1292 HKOGLL_08260 62111 63070 -1 lys9 diaminopimelate dehydrogenase Morganella morganii S5
13 group_2697 HKOGLL_10755 43143 44069 1 mviM putative dehydrogenase Morganella morganii S5
14 group_924 HKOGLL_11385 170823 171863 1 mviM putative dehydrogenase Morganella morganii S5
15 group_2697 F4V73_RS03655 776589 777524 1 Gfo/Idh/MocA family oxidoreductase Morganella psychrotolerans
16 group_924 F4V73_RS05460 1161358 1162398 -1 oxidoreductase Morganella psychrotolerans
17 group_1292 F4V73_RS13155 247855 248748 -1 diaminopimelate dehydrogenase Morganella psychrotolerans
18 group_924 PMI_RS06280 1377259 1378302 -1 oxidoreductase Proteus mirabilis HI4320