COG0611


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0611, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Thiamine monophosphate kinase
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG0611 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2253 FBDBKF_17365 4568 5557 -1 thiL thiamine-phosphate kinase Morganella morganii S1
1 group_2253 EHELCC_17260 4568 5557 -1 thiL thiamine-phosphate kinase Morganella morganii S2
2 group_2253 NLDBIP_17935 37239 38228 1 thiL thiamine-phosphate kinase Morganella morganii S4
3 group_2253 LHKJJB_17855 37237 38226 1 thiL thiamine-phosphate kinase Morganella morganii S3
4 group_2253 HKOGLL_17865 37237 38226 1 thiL thiamine-phosphate kinase Morganella morganii S5
5 group_2253 F4V73_RS16540 128265 129254 -1 thiL thiamine-phosphate kinase Morganella psychrotolerans
6 group_2253 PMI_RS00405 111789 112769 1 thiL thiamine-phosphate kinase Proteus mirabilis HI4320