COG0528


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0528, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uridylate kinase
Function(s) descr. Nucleotide transport and metabolism (F)

Occurence in the database

COG0528 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1060 FBDBKF_06000 26239 26967 -1 pyrH UMP kinase Morganella morganii S1
1 group_1060 EHELCC_09045 26811 27539 -1 pyrH UMP kinase Morganella morganii S2
2 group_1060 NLDBIP_09425 26811 27539 -1 pyrH UMP kinase Morganella morganii S4
3 group_1060 LHKJJB_08330 189699 190427 1 pyrH UMP kinase Morganella morganii S3
4 group_1060 HKOGLL_07880 189699 190427 1 pyrH UMP kinase Morganella morganii S5
5 group_1060 F4V73_RS15895 186249 186977 1 pyrH UMP kinase Morganella psychrotolerans
6 group_1060 PMI_RS11275 2481807 2482535 -1 pyrH UMP kinase Proteus mirabilis HI4320