COG0519


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0519, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description GMP synthase, PP-ATPase domain/subunit
Function(s) descr. Nucleotide transport and metabolism (F)

Occurence in the database

COG0519 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2231 FBDBKF_17100 3182 4759 -1 guaA glutamine-hydrolyzing GMP synthase Morganella morganii S1
1 group_2231 EHELCC_01790 350742 352319 1 guaA glutamine-hydrolyzing GMP synthase Morganella morganii S2
2 group_2231 NLDBIP_01670 327817 329394 -1 guaA glutamine-hydrolyzing GMP synthase Morganella morganii S4
3 group_2231 LHKJJB_00365 63291 64868 1 guaA glutamine-hydrolyzing GMP synthase Morganella morganii S3
4 group_2231 HKOGLL_00405 68802 70379 1 guaA glutamine-hydrolyzing GMP synthase Morganella morganii S5
5 group_2231 F4V73_RS05860 1247596 1249173 -1 guaA glutamine-hydrolyzing GMP synthase Morganella psychrotolerans
6 group_2231 PMI_RS07520 1638027 1639604 -1 guaA glutamine-hydrolyzing GMP synthase Proteus mirabilis HI4320