COG0509


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0509, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Glycine cleavage system protein H (lipoate-binding)
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0509 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_824 FBDBKF_04135 13165 13560 -1 gcvH glycine cleavage system protein GcvH Morganella morganii S1
1 group_824 EHELCC_05425 72622 73017 -1 gcvH glycine cleavage system protein GcvH Morganella morganii S2
2 group_824 NLDBIP_05745 113687 114082 -1 gcvH glycine cleavage system protein GcvH Morganella morganii S4
3 group_824 LHKJJB_02625 91211 91606 -1 gcvH glycine cleavage system protein GcvH Morganella morganii S3
4 group_824 HKOGLL_06100 13075 13470 -1 gcvH glycine cleavage system protein GcvH Morganella morganii S5
5 group_824 F4V73_RS08580 1772524 1772919 -1 gcvH glycine cleavage system protein GcvH Morganella psychrotolerans
6 group_824 PMI_RS09960 2160045 2160437 -1 gcvH glycine cleavage system protein GcvH Proteus mirabilis HI4320