COG0481


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0481, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Translation elongation factor EF-4, membrane-bound GTPase
Function(s) descr. Translation, ribosomal structure and biogenesis (J)

Occurence in the database

COG0481 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_561 FBDBKF_01425 277969 279768 -1 lepA translation elongation factor 4 Morganella morganii S1
1 group_561 EHELCC_00120 29100 30899 1 lepA translation elongation factor 4 Morganella morganii S2
2 group_561 NLDBIP_03340 649237 651036 -1 lepA translation elongation factor 4 Morganella morganii S4
3 group_561 LHKJJB_04855 256478 258277 -1 lepA translation elongation factor 4 Morganella morganii S3
4 group_561 HKOGLL_02190 29305 31104 1 lepA translation elongation factor 4 Morganella morganii S5
5 group_561 F4V73_RS01970 428770 430566 1 lepA translation elongation factor 4 Morganella psychrotolerans
6 group_561 PMI_RS09330 2036340 2038136 -1 lepA translation elongation factor 4 Proteus mirabilis HI4320