COG0321


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0321, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Lipoate-protein ligase B
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG0321 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1560 FBDBKF_10105 113322 113954 1 lipB lipoyl(octanoyl) transferase LipB Morganella morganii S1
1 group_1560 EHELCC_04905 305287 305919 1 lipB lipoyl(octanoyl) transferase LipB Morganella morganii S2
2 group_1560 NLDBIP_04905 305083 305715 1 lipB lipoyl(octanoyl) transferase LipB Morganella morganii S4
3 group_1560 LHKJJB_13725 29663 30295 -1 lipB lipoyl(octanoyl) transferase LipB Morganella morganii S3
4 group_1560 HKOGLL_12810 114103 114735 1 lipB lipoyl(octanoyl) transferase LipB Morganella morganii S5
5 group_1560 F4V73_RS00230 57474 58112 -1 lipB lipoyl(octanoyl) transferase LipB Morganella psychrotolerans
6 group_1560 PMI_RS02075 488471 489115 -1 lipB lipoyl(octanoyl) transferase LipB Proteus mirabilis HI4320