COG0267


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0267, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Ribosomal protein L33
Function(s) descr. Translation, ribosomal structure and biogenesis (J)

Occurence in the database

COG0267 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2160 FBDBKF_16250 38096 38263 1 rpmG 50S ribosomal protein L33 Morganella morganii S1
1 group_2160 EHELCC_16285 38096 38263 1 rpmG 50S ribosomal protein L33 Morganella morganii S2
2 group_2160 NLDBIP_17055 23907 24074 -1 rpmG 50S ribosomal protein L33 Morganella morganii S4
3 group_2160 LHKJJB_16975 27009 27176 -1 rpmG 50S ribosomal protein L33 Morganella morganii S3
4 group_2160 HKOGLL_16865 38096 38263 1 rpmG 50S ribosomal protein L33 Morganella morganii S5
5 group_2160 F4V73_RS17345 102631 102798 -1 rpmG 50S ribosomal protein L33 Morganella psychrotolerans
6 group_2160 PMI_RS15615 3470506 3470673 1 rpmG 50S ribosomal protein L33 Proteus mirabilis HI4320