COG0212


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0212, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description 5-formyltetrahydrofolate cyclo-ligase
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG0212 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_830 FBDBKF_04175 20257 20862 1 5-formyltetrahydrofolate cyclo-ligase Morganella morganii S1
1 group_830 EHELCC_05465 79714 80319 1 5-formyltetrahydrofolate cyclo-ligase Morganella morganii S2
2 group_830 NLDBIP_05785 120779 121384 1 5-formyltetrahydrofolate cyclo-ligase Morganella morganii S4
3 group_830 LHKJJB_02665 98303 98908 1 5-formyltetrahydrofolate cyclo-ligase Morganella morganii S3
4 group_830 HKOGLL_06140 20167 20772 1 5-formyltetrahydrofolate cyclo-ligase Morganella morganii S5
5 group_830 F4V73_RS08620 1779685 1780290 1 5-formyltetrahydrofolate cyclo-ligase Morganella psychrotolerans
6 group_830 PMI_RS09995 2167349 2167966 1 5-formyltetrahydrofolate cyclo-ligase Proteus mirabilis HI4320