COG0111
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0111, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 21 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description |
Phosphoglycerate dehydrogenase or related dehydrogenase |
Function(s) descr. |
Coenzyme transport and metabolism (H) |
Occurence in the database
COG0111 is associated with 21 different proteins (see tab "Protein list" and "Profile") |
The 21 proteins are classified into 3 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_618 |
FBDBKF_01965 |
79960 |
80901 |
1 |
ghrA |
glyoxylate/hydroxypyruvate reductase GhrA |
Morganella morganii S1 |
1 |
group_831 |
FBDBKF_04180 |
21061 |
22311 |
-1 |
serA |
phosphoglycerate dehydrogenase |
Morganella morganii S1 |
2 |
group_1918 |
FBDBKF_14275 |
54315 |
55460 |
-1 |
pdxB |
4-phosphoerythronate dehydrogenase PdxB |
Morganella morganii S1 |
3 |
group_618 |
EHELCC_02435 |
467780 |
468721 |
1 |
ghrA |
glyoxylate/hydroxypyruvate reductase GhrA |
Morganella morganii S2 |
4 |
group_831 |
EHELCC_05470 |
80518 |
81768 |
-1 |
serA |
phosphoglycerate dehydrogenase |
Morganella morganii S2 |
5 |
group_1918 |
EHELCC_08005 |
61525 |
62670 |
1 |
pdxB |
4-phosphoerythronate dehydrogenase PdxB |
Morganella morganii S2 |
6 |
group_618 |
NLDBIP_01025 |
211415 |
212356 |
-1 |
ghrA |
glyoxylate/hydroxypyruvate reductase GhrA |
Morganella morganii S4 |
7 |
group_831 |
NLDBIP_05790 |
121583 |
122833 |
-1 |
serA |
phosphoglycerate dehydrogenase |
Morganella morganii S4 |
8 |
group_1918 |
NLDBIP_08330 |
61525 |
62670 |
1 |
pdxB |
4-phosphoerythronate dehydrogenase PdxB |
Morganella morganii S4 |
9 |
group_618 |
LHKJJB_01010 |
180329 |
181270 |
1 |
ghrA |
glyoxylate/hydroxypyruvate reductase GhrA |
Morganella morganii S3 |
10 |
group_831 |
LHKJJB_02670 |
99107 |
100357 |
-1 |
serA |
phosphoglycerate dehydrogenase |
Morganella morganii S3 |
11 |
group_1918 |
LHKJJB_05935 |
194489 |
195634 |
-1 |
pdxB |
4-phosphoerythronate dehydrogenase PdxB |
Morganella morganii S3 |
12 |
group_618 |
HKOGLL_01050 |
185840 |
186781 |
1 |
ghrA |
glyoxylate/hydroxypyruvate reductase GhrA |
Morganella morganii S5 |
13 |
group_1918 |
HKOGLL_04980 |
46116 |
47261 |
1 |
pdxB |
4-phosphoerythronate dehydrogenase PdxB |
Morganella morganii S5 |
14 |
group_831 |
HKOGLL_06145 |
20971 |
22221 |
-1 |
serA |
phosphoglycerate dehydrogenase |
Morganella morganii S5 |
15 |
group_1918 |
F4V73_RS02635 |
555045 |
556175 |
1 |
pdxB |
4-phosphoerythronate dehydrogenase PdxB |
Morganella psychrotolerans |
16 |
group_618 |
F4V73_RS04310 |
910345 |
911286 |
1 |
ghrA |
glyoxylate/hydroxypyruvate reductase GhrA |
Morganella psychrotolerans |
17 |
group_831 |
F4V73_RS08625 |
1780485 |
1781735 |
-1 |
serA |
phosphoglycerate dehydrogenase |
Morganella psychrotolerans |
18 |
group_618 |
PMI_RS05305 |
1158306 |
1159247 |
1 |
ghrA |
glyoxylate/hydroxypyruvate reductase GhrA |
Proteus mirabilis HI4320 |
19 |
group_1918 |
PMI_RS08785 |
1920895 |
1922022 |
-1 |
pdxB |
4-phosphoerythronate dehydrogenase PdxB |
Proteus mirabilis HI4320 |
20 |
group_831 |
PMI_RS10015 |
2173709 |
2174959 |
-1 |
serA |
phosphoglycerate dehydrogenase |
Proteus mirabilis HI4320 |