COG0111


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0111, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phosphoglycerate dehydrogenase or related dehydrogenase
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG0111 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_618 FBDBKF_01965 79960 80901 1 ghrA glyoxylate/hydroxypyruvate reductase GhrA Morganella morganii S1
1 group_831 FBDBKF_04180 21061 22311 -1 serA phosphoglycerate dehydrogenase Morganella morganii S1
2 group_1918 FBDBKF_14275 54315 55460 -1 pdxB 4-phosphoerythronate dehydrogenase PdxB Morganella morganii S1
3 group_618 EHELCC_02435 467780 468721 1 ghrA glyoxylate/hydroxypyruvate reductase GhrA Morganella morganii S2
4 group_831 EHELCC_05470 80518 81768 -1 serA phosphoglycerate dehydrogenase Morganella morganii S2
5 group_1918 EHELCC_08005 61525 62670 1 pdxB 4-phosphoerythronate dehydrogenase PdxB Morganella morganii S2
6 group_618 NLDBIP_01025 211415 212356 -1 ghrA glyoxylate/hydroxypyruvate reductase GhrA Morganella morganii S4
7 group_831 NLDBIP_05790 121583 122833 -1 serA phosphoglycerate dehydrogenase Morganella morganii S4
8 group_1918 NLDBIP_08330 61525 62670 1 pdxB 4-phosphoerythronate dehydrogenase PdxB Morganella morganii S4
9 group_618 LHKJJB_01010 180329 181270 1 ghrA glyoxylate/hydroxypyruvate reductase GhrA Morganella morganii S3
10 group_831 LHKJJB_02670 99107 100357 -1 serA phosphoglycerate dehydrogenase Morganella morganii S3
11 group_1918 LHKJJB_05935 194489 195634 -1 pdxB 4-phosphoerythronate dehydrogenase PdxB Morganella morganii S3
12 group_618 HKOGLL_01050 185840 186781 1 ghrA glyoxylate/hydroxypyruvate reductase GhrA Morganella morganii S5
13 group_1918 HKOGLL_04980 46116 47261 1 pdxB 4-phosphoerythronate dehydrogenase PdxB Morganella morganii S5
14 group_831 HKOGLL_06145 20971 22221 -1 serA phosphoglycerate dehydrogenase Morganella morganii S5
15 group_1918 F4V73_RS02635 555045 556175 1 pdxB 4-phosphoerythronate dehydrogenase PdxB Morganella psychrotolerans
16 group_618 F4V73_RS04310 910345 911286 1 ghrA glyoxylate/hydroxypyruvate reductase GhrA Morganella psychrotolerans
17 group_831 F4V73_RS08625 1780485 1781735 -1 serA phosphoglycerate dehydrogenase Morganella psychrotolerans
18 group_618 PMI_RS05305 1158306 1159247 1 ghrA glyoxylate/hydroxypyruvate reductase GhrA Proteus mirabilis HI4320
19 group_1918 PMI_RS08785 1920895 1922022 -1 pdxB 4-phosphoerythronate dehydrogenase PdxB Proteus mirabilis HI4320
20 group_831 PMI_RS10015 2173709 2174959 -1 serA phosphoglycerate dehydrogenase Proteus mirabilis HI4320