COG0108


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0108, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description 3,4-dihydroxy-2-butanone 4-phosphate synthase
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG0108 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1114 FBDBKF_06355 104447 105100 -1 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase Morganella morganii S1
1 group_1114 EHELCC_09400 105019 105672 -1 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase Morganella morganii S2
2 group_1114 NLDBIP_09780 105019 105672 -1 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase Morganella morganii S4
3 group_1114 LHKJJB_07975 111566 112219 1 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase Morganella morganii S3
4 group_1114 HKOGLL_07525 111566 112219 1 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase Morganella morganii S5
5 group_1114 F4V73_RS15570 108975 109628 1 ribB 3,4-dihydroxy-2-butanone-4-phosphate synthase Morganella psychrotolerans
6 group_1114 PMI_RS11640 2572099 2572752 -1 ribB 3,4-dihydroxy-2-butanone-4-phosphate synthase Proteus mirabilis HI4320