COG0071


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0071, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Small heat shock protein IbpA, HSP20 family
Function(s) descr. Posttranslational modification, protein turnover, chaperones (O)

Occurence in the database

COG0071 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2465 FBDBKF_00160 26824 27282 -1 ibpA Small heat shock protein IbpA, HSP20 family Morganella morganii S1
1 group_2465 EHELCC_01385 281586 282044 1 ibpA Small heat shock protein IbpA, HSP20 family Morganella morganii S2
2 group_2465 NLDBIP_02075 398092 398550 -1 ibpA Small heat shock protein IbpA, HSP20 family Morganella morganii S4
3 group_2465 LHKJJB_03590 5333 5791 -1 ibpA Small heat shock protein IbpA, HSP20 family Morganella morganii S3
4 group_2465 HKOGLL_03455 281791 282249 1 ibpA Small heat shock protein IbpA, HSP20 family Morganella morganii S5
5 group_2465 PMI_RS04750 1046145 1046603 1 Hsp20 family protein Proteus mirabilis HI4320