COG0027


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0027, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase)
Function(s) descr. Nucleotide transport and metabolism (F)

Occurence in the database

COG0027 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1289 FBDBKF_07830 92361 93581 1 purT formate-dependent phosphoribosylglycinamide formyltransferase Morganella morganii S1
1 group_1289 EHELCC_13660 66555 67775 1 purT formate-dependent phosphoribosylglycinamide formyltransferase Morganella morganii S2
2 group_1289 NLDBIP_14105 87430 88650 1 purT formate-dependent phosphoribosylglycinamide formyltransferase Morganella morganii S4
3 group_1289 LHKJJB_08745 71099 72319 -1 purT formate-dependent phosphoribosylglycinamide formyltransferase Morganella morganii S3
4 group_1289 HKOGLL_08295 71099 72319 -1 purT formate-dependent phosphoribosylglycinamide formyltransferase Morganella morganii S5
5 group_1289 F4V73_RS13215 263939 265117 -1 purT formate-dependent phosphoribosylglycinamide formyltransferase Morganella psychrotolerans
6 group_1289 PMI_RS10775 2372669 2373868 -1 purT formate-dependent phosphoribosylglycinamide formyltransferase Proteus mirabilis HI4320