merP


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected AMR genes merP, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the AMR genes within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the AMR gene(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported AMR genes has been clustered.
In red the AMR genes with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and AMR genes prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered AMR genes.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or AMR genes prediction.

Description

Gene merP
Description mercury resistance system periplasmic binding protein MerP
Scope plus
Type STRESS
Class MERCURY
Subclass MERCURY
HMM TIGR02052 

Occurence in the database

merP is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2953 FBDBKF_15720 77664 77939 -1 merP mercury resistance system periplasmic binding protein MerP Morganella morganii S1
1 group_2953 EHELCC_16075 76964 77239 -1 merP mercury resistance system periplasmic binding protein MerP Morganella morganii S2
2 group_2953 NLDBIP_16290 3424 3699 1 merP mercury resistance system periplasmic binding protein MerP Morganella morganii S4
3 group_2953 LHKJJB_16510 76964 77239 -1 merP mercury resistance system periplasmic binding protein MerP Morganella morganii S3
4 group_2953 HKOGLL_16280 76964 77239 -1 merP mercury resistance system periplasmic binding protein MerP Morganella morganii S5