Help to interpret the results
The page contains two contents:
General: this table lists the KO entries and their description specific to this pathway, and provides their frequencies in Morganella morganii S2 and in the whole dataset.
Profile + homologs: the distribution of the Kegg entries of Mismatch repair Kegg pathway is displayed here. Given a Kegg entry and a genome, a red box indicates that one or more loci have been annotated with, while a green box indicates that no locus/loci has(have) been annotated with it, but it/they is/are part of an Orthologous group in which other members have been annotated with that Kegg entry, so it is likely that this copy(ies) also performs this Kegg function.
Check the composition of the Mismatch repair pathway
| KO | Description | #in this genome | All occurrences |
|---|---|---|---|
| K01141 | exodeoxyribonuclease I [EC:3.1.11.1] | 1 | 7 |
| K01972 | DNA ligase (NAD+) [EC:6.5.1.2] | 1 | 8 |
| K02327 | DNA polymerase delta subunit 1 [EC:2.7.7.7] | 0 | 0 |
| K02328 | DNA polymerase delta subunit 2 | 0 | 0 |
| K02337 | DNA polymerase III subunit alpha [EC:2.7.7.7] | 1 | 7 |
| K02338 | DNA polymerase III subunit beta [EC:2.7.7.7] | 1 | 7 |
| K02339 | DNA polymerase III subunit chi [EC:2.7.7.7] | 1 | 7 |
| K02340 | DNA polymerase III subunit delta [EC:2.7.7.7] | 1 | 7 |
| K02341 | DNA polymerase III subunit delta' [EC:2.7.7.7] | 1 | 7 |
| K02342 | DNA polymerase III subunit epsilon [EC:2.7.7.7] | 1 | 8 |
| K02343 | DNA polymerase III subunit gamma/tau [EC:2.7.7.7] | 1 | 7 |
| K02344 | DNA polymerase III subunit psi [EC:2.7.7.7] | 1 | 7 |
| K02345 | DNA polymerase III subunit theta [EC:2.7.7.7] | 2 | 13 |
| K03111 | single-strand DNA-binding protein | 4 | 25 |
| K03504 | DNA polymerase delta subunit 3 | 0 | 0 |
| K03505 | DNA polymerase delta subunit 4 | 0 | 0 |
| K03555 | DNA mismatch repair protein MutS | 1 | 7 |
| K03572 | DNA mismatch repair protein MutL | 1 | 7 |
| K03573 | DNA mismatch repair protein MutH | 1 | 7 |
| K03601 | exodeoxyribonuclease VII large subunit [EC:3.1.11.6] | 1 | 7 |
| K03602 | exodeoxyribonuclease VII small subunit [EC:3.1.11.6] | 1 | 7 |
| K03657 | ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] | 1 | 7 |
| K03763 | DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] | 0 | 0 |
| K04802 | proliferating cell nuclear antigen | 0 | 0 |
| K06223 | DNA adenine methylase [EC:2.1.1.72] | 1 | 8 |
| K07456 | DNA mismatch repair protein MutS2 | 0 | 0 |
| K07462 | single-stranded-DNA-specific exonuclease [EC:3.1.-.-] | 1 | 7 |
| K07466 | replication factor A1 | 0 | 0 |
| K08734 | DNA mismatch repair protein MLH1 | 0 | 0 |
| K08735 | DNA mismatch repair protein MSH2 | 0 | 0 |
| K08736 | DNA mismatch repair protein MSH3 | 0 | 0 |
| K08737 | DNA mismatch repair protein MSH6 | 0 | 0 |
| K08739 | DNA mismatch repair protein MLH3 | 0 | 0 |
| K10739 | replication factor A2 | 0 | 0 |
| K10740 | replication factor A3 | 0 | 0 |
| K10741 | replication factor A4 | 0 | 0 |
| K10746 | exonuclease 1 [EC:3.1.-.-] | 0 | 0 |
| K10747 | DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | 0 | 0 |
| K10754 | replication factor C subunit 1 | 0 | 0 |
| K10755 | replication factor C subunit 2/4 | 0 | 0 |
| K10756 | replication factor C subunit 3/5 | 0 | 0 |
| K10857 | exodeoxyribonuclease X [EC:3.1.11.-] | 0 | 0 |
| K10858 | DNA mismatch repair protein PMS2 | 0 | 0 |
| K14159 | ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7] | 0 | 0 |