Orthogroup:group_947


Homologs in group_947

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05170 FBDBKF_05170 Morganella morganii S1 trpF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF
EHELCC_12420 EHELCC_12420 Morganella morganii S2 trpF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF
NLDBIP_12760 NLDBIP_12760 Morganella morganii S4 trpF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF
LHKJJB_12620 LHKJJB_12620 Morganella morganii S3 trpF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF
HKOGLL_11235 HKOGLL_11235 Morganella morganii S5 trpF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF
F4V73_RS05625 F4V73_RS05625 Morganella psychrotolerans trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF
PMI_RS06495 PMI_RS06495 Proteus mirabilis HI4320 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF

Distribution of group_947 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_947 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_947

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_947.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 trpF 5
2 trpCF 2

Product

# Product Occurence
1 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0134 7 E Amino acid transport and metabolism (E) Indole-3-glycerol phosphate synthase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K13498 7 indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids		 Tryptophan biosynthesis, chorismate => tryptophan

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00218 7 Indole-3-glycerol phosphate synthase
PF00697 7 N-(5'phosphoribosyl)anthranilate (PRA) isomerase

Annotations of the 541 SwissProt hits

Annotation Number of occurrences
Indole-3-glycerol phosphate synthase 365
Indole-3-glycerol phosphate synthase 1 2
Indole-3-glycerol phosphate synthase 2 2
Indole-3-glycerol phosphate synthase, chloroplastic 1
Multifunctional tryptophan biosynthesis protein 13
N-(5'-phosphoribosyl)anthranilate isomerase 140
Tryptophan biosynthesis protein TRP1 1
Tryptophan biosynthesis protein TrpCF 17

Protein length

Min length 455
Max length 457
Mean length (sd) 455.3 (0.8)
Median length 455.0

Protein length distribution