Orthogroup:group_927


Homologs in group_927

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05035 FBDBKF_05035 Morganella morganii S1 rsxC electron transport complex subunit RsxC
EHELCC_12555 EHELCC_12555 Morganella morganii S2 rsxC electron transport complex subunit RsxC
NLDBIP_12895 NLDBIP_12895 Morganella morganii S4 rsxC electron transport complex subunit RsxC
LHKJJB_12755 LHKJJB_12755 Morganella morganii S3 rsxC electron transport complex subunit RsxC
HKOGLL_11370 HKOGLL_11370 Morganella morganii S5 rsxC electron transport complex subunit RsxC
F4V73_RS05475 F4V73_RS05475 Morganella psychrotolerans rsxC electron transport complex subunit RsxC
PMI_RS06300 PMI_RS06300 Proteus mirabilis HI4320 rsxC electron transport complex subunit RsxC

Distribution of group_927 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_927 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_927

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_927.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rsxC 7

Product

# Product Occurence
1 electron transport complex subunit RsxC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4656 7 C Energy production and conversion (C) Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03615 7 H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01512 7 Respiratory-chain NADH dehydrogenase 51 Kd subunit
PF10531 7 SLBB domain
PF12838 7 4Fe-4S dicluster domain
PF13375 7 RnfC Barrel sandwich hybrid domain

Annotations of the 169 SwissProt hits

Annotation Number of occurrences
Acetyl-CoA decarbonylase/synthase complex subunit alpha 2 2
Acetyl-CoA decarbonylase/synthase complex subunit alpha 3 1
Cobalamin reductase PduS 2
Ferredoxin-1 1
Ferredoxin-2 1
Formate dehydrogenase subunit beta 1
Ion-translocating oxidoreductase complex subunit C 72
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial 5
NADH-quinone oxidoreductase subunit I 4
Na(+)-translocating ferredoxin:NAD(+) oxidoreductase complex subunit C 1
Photosystem I iron-sulfur center 76
Proton-translocating ferredoxin:NAD(+) oxidoreductase complex subunit C 1
Uncharacterized ferredoxin MJ0722 1
Uncharacterized polyferredoxin-like protein MJ0514.1 1

Protein length

Min length 677
Max length 839
Mean length (sd) 773.7 (48.0)
Median length 780.0

Protein length distribution