Orthogroup:group_920



Homologs in group_920

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04990 FBDBKF_04990 Morganella morganii S1 fumC class II fumarate hydratase
EHELCC_12600 EHELCC_12600 Morganella morganii S2 fumC class II fumarate hydratase
NLDBIP_12940 NLDBIP_12940 Morganella morganii S4 fumC class II fumarate hydratase
LHKJJB_12800 LHKJJB_12800 Morganella morganii S3 fumC class II fumarate hydratase
HKOGLL_11415 HKOGLL_11415 Morganella morganii S5 fumC class II fumarate hydratase
F4V73_RS05435 F4V73_RS05435 Morganella psychrotolerans fumC class II fumarate hydratase
PMI_RS06255 PMI_RS06255 Proteus mirabilis HI4320 fumC class II fumarate hydratase

Distribution of group_920 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_920 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_920

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_920.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fumC 7

Product

# Product Occurence
1 class II fumarate hydratase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0114 7 C Energy production and conversion (C) Fumarate hydratase class II

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00206 7 Lyase
PF10415 7 Fumarase C C-terminus

Annotations of the 573 SwissProt hits

Annotation Number of occurrences
3-carboxy-cis,cis-muconate cycloisomerase 2
3-carboxy-cis,cis-muconate cycloisomerase (Fragment) 1
Adenylosuccinate lyase 35
Argininosuccinate lyase 405
Argininosuccinate lyase (Fragment) 1
Argininosuccinate lyase 1 3
Argininosuccinate lyase 2 3
Aspartate ammonia-lyase 14
Bifunctional protein ArgH 1
Bifunctional protein ArgHA (Fragment) 1
Delta-1 crystallin 1
Fumarate hydratase 1, mitochondrial 1
Fumarate hydratase 2 1
Fumarate hydratase class II 84
Fumarate hydratase class II 1 2
Fumarate hydratase class II 2 2
Fumarate hydratase, mitochondrial 10
N-acetyl-S-(2-succino)cysteine lyase 2
Probable argininosuccinate lyase 1
Probable fumarate hydratase, mitochondrial 1
Trans-aconitate decarboxylase 1 1
Uncharacterized protein C8E4.05c 1

Protein length

Min length 464
Max length 465
Mean length (sd) 464.1 (0.4)
Median length 464.0

Protein length distribution