Orthogroup:group_883



Homologs in group_883

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04540 FBDBKF_04540 Morganella morganii S1 arsR DNA-binding transcriptional regulator, ArsR family
EHELCC_05830 EHELCC_05830 Morganella morganii S2 arsR DNA-binding transcriptional regulator, ArsR family
NLDBIP_06150 NLDBIP_06150 Morganella morganii S4 arsR DNA-binding transcriptional regulator, ArsR family
LHKJJB_03030 LHKJJB_03030 Morganella morganii S3 arsR DNA-binding transcriptional regulator, ArsR family
HKOGLL_06505 HKOGLL_06505 Morganella morganii S5 arsR DNA-binding transcriptional regulator, ArsR family
F4V73_RS08995 F4V73_RS08995 Morganella psychrotolerans - metalloregulator ArsR/SmtB family transcription factor
PMI_RS10365 PMI_RS10365 Proteus mirabilis HI4320 - metalloregulator ArsR/SmtB family transcription factor

Distribution of group_883 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_883 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_883

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_883.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 arsR 5
2 - 2

Product

# Product Occurence
1 DNA-binding transcriptional regulator, ArsR family 5
2 metalloregulator ArsR/SmtB family transcription factor 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0640 7 K Transcription (K) DNA-binding transcriptional regulator, ArsR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K22042 7 ArsR family transcriptional regulator, virulence genes transcriptional regulator - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01022 7 Bacterial regulatory protein, arsR family

Annotations of the 34 SwissProt hits

Annotation Number of occurrences
Arsenic resistance transcriptional regulator ArsR1 1
Arsenical resistance operon repressor 3
Biofilm growth-associated repressor 3
Cadmium resistance transcriptional regulatory protein CadC 3
Cadmium resistance transcriptional regulatory protein CadC homolog 1
HTH-type transcriptional regulator CmtR 3
HTH-type transcriptional regulator KmtR 1
HTH-type transcriptional regulator NmtR 1
HTH-type transcriptional regulator Rv0324 1
HTH-type transcriptional repressor AseR 1
HTH-type transcriptional repressor CzrA 1
HTH-type transcriptional repressor SmtB 2
Nodulation protein NolR 1
Probable HTH-type transcriptional regulator YgaV 1
Probable mercury resistance operon repressor 1
Putative arsenical resistance operon repressor ArsR2 1
Transcriptional activator HlyU 1
Transcriptional repressor PagR 1
Transcriptional repressor SdpR 1
Transcriptional repressor SmtB 1
Transcriptional repressor SmtB homolog 1
Uncharacterized HTH-type transcriptional regulator MJ1325 1
Uncharacterized HTH-type transcriptional regulator MT0088 1
Uncharacterized HTH-type transcriptional regulator Rv0081 1
Uncharacterized HTH-type transcriptional regulator YczG 1

Protein length

Min length 105
Max length 109
Mean length (sd) 105.9 (1.6)
Median length 105.0

Protein length distribution