Orthogroup:group_871



Homologs in group_871

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04420 FBDBKF_04420 Morganella morganii S1 leuC Homoaconitase/3-isopropylmalate dehydratase large subunit
EHELCC_05710 EHELCC_05710 Morganella morganii S2 leuC Homoaconitase/3-isopropylmalate dehydratase large subunit
NLDBIP_06030 NLDBIP_06030 Morganella morganii S4 leuC Homoaconitase/3-isopropylmalate dehydratase large subunit
LHKJJB_02910 LHKJJB_02910 Morganella morganii S3 leuC Homoaconitase/3-isopropylmalate dehydratase large subunit
HKOGLL_06385 HKOGLL_06385 Morganella morganii S5 leuC Homoaconitase/3-isopropylmalate dehydratase large subunit
F4V73_RS08865 F4V73_RS08865 Morganella psychrotolerans leuC 3-isopropylmalate dehydratase large subunit
PMI_RS10275 PMI_RS10275 Proteus mirabilis HI4320 leuC 3-isopropylmalate dehydratase large subunit

Distribution of group_871 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_871 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_871

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_871.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 leuC 7

Product

# Product Occurence
1 Homoaconitase/3-isopropylmalate dehydratase large subunit 5
2 3-isopropylmalate dehydratase large subunit 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0065 7 E Amino acid transport and metabolism (E) Homoaconitase/3-isopropylmalate dehydratase large subunit

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00330 7 Aconitase family (aconitate hydratase)

Annotations of the 506 SwissProt hits

Annotation Number of occurrences
3-isopropylmalate dehydratase 9
3-isopropylmalate dehydratase large subunit 465
3-isopropylmalate dehydratase large subunit (Fragment) 12
3-isopropylmalate dehydratase large subunit 1 9
3-isopropylmalate dehydratase large subunit 2 5
Isopropylmalate/citramalate isomerase large subunit 1
Methanogen homoaconitase large subunit 1
Probable 3-isopropylmalate dehydratase large subunit 1
Probable methanogen homoaconitase large subunit 3

Protein length

Min length 469
Max length 470
Mean length (sd) 469.9 (0.4)
Median length 470.0

Protein length distribution