Orthogroup:group_868


Homologs in group_868

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04405 FBDBKF_04405 Morganella morganii S1 leuO transcriptional regulator LeuO
EHELCC_05695 EHELCC_05695 Morganella morganii S2 leuO transcriptional regulator LeuO
NLDBIP_06015 NLDBIP_06015 Morganella morganii S4 leuO transcriptional regulator LeuO
LHKJJB_02895 LHKJJB_02895 Morganella morganii S3 leuO transcriptional regulator LeuO
HKOGLL_06370 HKOGLL_06370 Morganella morganii S5 leuO transcriptional regulator LeuO
F4V73_RS08850 F4V73_RS08850 Morganella psychrotolerans leuO transcriptional regulator LeuO
PMI_RS10260 PMI_RS10260 Proteus mirabilis HI4320 leuO transcriptional regulator LeuO

Distribution of group_868 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_868 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_868

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_868.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 leuO 7

Product

# Product Occurence
1 transcriptional regulator LeuO 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0583 7 K Transcription (K) DNA-binding transcriptional regulator, LysR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05798 7 LysR family transcriptional regulator, transcriptional activator for leuABCD operon - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00126 7 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 7 LysR substrate binding domain

Annotations of the 128 SwissProt hits

Annotation Number of occurrences
Carbapenem-hydrolyzing beta-lactamase transcriptional activator 1
HTH-type transcriptional activator AmpR 2
HTH-type transcriptional activator CmpR 2
HTH-type transcriptional activator NagR 1
HTH-type transcriptional activator NahR 1
HTH-type transcriptional regulator AbaB 1
HTH-type transcriptional regulator AbgR 1
HTH-type transcriptional regulator AceR 1
HTH-type transcriptional regulator AlsR 1
HTH-type transcriptional regulator ArgP 3
HTH-type transcriptional regulator BbuR 1
HTH-type transcriptional regulator BenM 1
HTH-type transcriptional regulator BlaA 1
HTH-type transcriptional regulator BudR (Fragment) 1
HTH-type transcriptional regulator CatM 1
HTH-type transcriptional regulator CatR 1
HTH-type transcriptional regulator CbbR 1
HTH-type transcriptional regulator CitR 1
HTH-type transcriptional regulator CrgA 2
HTH-type transcriptional regulator CynR 2
HTH-type transcriptional regulator CysB 1
HTH-type transcriptional regulator CysL 1
HTH-type transcriptional regulator GalR 1
HTH-type transcriptional regulator GbpR 2
HTH-type transcriptional regulator GltR 1
HTH-type transcriptional regulator LeuO 1
HTH-type transcriptional regulator LinR 1
HTH-type transcriptional regulator MetR 5
HTH-type transcriptional regulator NmoR 1
HTH-type transcriptional regulator PcaQ 2
HTH-type transcriptional regulator PecT 1
HTH-type transcriptional regulator PhcA 1
HTH-type transcriptional regulator SyrM 2
HTH-type transcriptional regulator SyrM 1 1
HTH-type transcriptional regulator SyrM 2 1
HTH-type transcriptional regulator TdcA 3
HTH-type transcriptional regulator TtuA 1
HTH-type transcriptional regulator YidZ 26
HTH-type transcriptional regulator YofA 1
HTH-type transcriptional regulator YtlI 1
Hca operon transcriptional activator HcaR 1
Hydrogen peroxide-inducible genes activator 1
Malonate utilization transcriptional regulator 1
Nitrogen assimilation regulatory protein nac 2
Nodulation protein D 5
Nodulation protein D 1 10
Nodulation protein D 2 8
Nodulation protein D 3 3
PCP degradation transcriptional activation protein 1
Probable HTH-type transcriptional regulator LeuO 1
Probable HTH-type transcriptional regulator LrhA 2
Probable HTH-type transcriptional regulator LrrA 1
Probable RuBisCO transcriptional regulator 1
RuBisCO operon transcriptional regulator 1
Transcriptional activator protein LysR 1
Transcriptional dual regulator GltC 1
Uncharacterized HTH-type transcriptional regulator MJ0300 1
Uncharacterized HTH-type transcriptional regulator YbdO 1
Uncharacterized HTH-type transcriptional regulator YbeF 1
Uncharacterized HTH-type transcriptional regulator YbhD 1
Uncharacterized HTH-type transcriptional regulator YdcI 1
Uncharacterized HTH-type transcriptional regulator YusT 1
Uncharacterized HTH-type transcriptional regulator YvbU 1
Uncharacterized HTH-type transcriptional regulator YybE 1

Protein length

Min length 314
Max length 315
Mean length (sd) 314.9 (0.4)
Median length 315.0

Protein length distribution