Orthogroup:group_861


Homologs in group_861

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04355 FBDBKF_04355 Morganella morganii S1 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase
EHELCC_05645 EHELCC_05645 Morganella morganii S2 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase
NLDBIP_05965 NLDBIP_05965 Morganella morganii S4 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase
LHKJJB_02845 LHKJJB_02845 Morganella morganii S3 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase
HKOGLL_06320 HKOGLL_06320 Morganella morganii S5 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase
F4V73_RS08800 F4V73_RS08800 Morganella psychrotolerans murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
PMI_RS10220 PMI_RS10220 Proteus mirabilis HI4320 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase

Distribution of group_861 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_861 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_861

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_861.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 murF 7

Product

# Product Occurence
1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase 5
2 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0770 7 M Cell wall/membrane/envelope biogenesis (M) UDP-N-acetylmuramyl pentapeptide synthase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01929 7 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Lysine biosynthesis
Peptidoglycan biosynthesis
Metabolic pathways
Vancomycin resistance		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01225 7 Mur ligase family, catalytic domain
PF02875 7 Mur ligase, glutamate ligase domain
PF08245 7 Mur ligase middle domain

Annotations of the 630 SwissProt hits

Annotation Number of occurrences
Bifunctional enzyme MurC/Ddl 1
UDP-N-acetylmuramate--L-alanine ligase 212
UDP-N-acetylmuramoyl-L-alanine--L-glutamate ligase 2
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 109
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 1 1
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 2 1
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 3
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase 33
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--LD-lysine ligase 1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 18
UDP-N-acetylmuramoylalanine--D-glutamate ligase 234
UDP-N-acetylmuramyl-tripeptide synthetase 14
UDP-N-acetylmuramyl-tripeptide synthetase 2 1

Protein length

Min length 457
Max length 460
Mean length (sd) 457.4 (1.1)
Median length 457.0

Protein length distribution