Orthogroup:group_848


Homologs in group_848

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04290 FBDBKF_04290 Morganella morganii S1 secA preprotein translocase subunit SecA
EHELCC_05580 EHELCC_05580 Morganella morganii S2 secA preprotein translocase subunit SecA
NLDBIP_05900 NLDBIP_05900 Morganella morganii S4 secA preprotein translocase subunit SecA
LHKJJB_02780 LHKJJB_02780 Morganella morganii S3 secA preprotein translocase subunit SecA
HKOGLL_06255 HKOGLL_06255 Morganella morganii S5 secA preprotein translocase subunit SecA
F4V73_RS08735 F4V73_RS08735 Morganella psychrotolerans secA preprotein translocase subunit SecA
PMI_RS10155 PMI_RS10155 Proteus mirabilis HI4320 secA preprotein translocase subunit SecA

Distribution of group_848 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_848 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_848

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_848.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 secA 7

Product

# Product Occurence
1 preprotein translocase subunit SecA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0653 7 U Intracellular trafficking, secretion, and vesicular transport (U) Preprotein translocase subunit SecA (ATPase, RNA helicase)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03070 7 preprotein translocase subunit SecA [EC:7.4.2.8] Quorum sensing
Protein export
Bacterial secretion system		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01043 7 SecA preprotein cross-linking domain
PF02810 7 SEC-C motif
PF07516 7 SecA Wing and Scaffold domain
PF07517 7 SecA DEAD-like domain
PF21090 7 SecA P-loop domain

Annotations of the 508 SwissProt hits

Annotation Number of occurrences
Protein translocase subunit SecA 483
Protein translocase subunit SecA 1 25

Protein length

Min length 902
Max length 903
Mean length (sd) 902.9 (0.4)
Median length 903.0

Protein length distribution