Orthogroup:group_842


Homologs in group_842

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04255 FBDBKF_04255 Morganella morganii S1 ppdD prepilin peptidase-dependent pilin
EHELCC_05545 EHELCC_05545 Morganella morganii S2 ppdD prepilin peptidase-dependent pilin
NLDBIP_05865 NLDBIP_05865 Morganella morganii S4 ppdD prepilin peptidase-dependent pilin
LHKJJB_02745 LHKJJB_02745 Morganella morganii S3 ppdD prepilin peptidase-dependent pilin
HKOGLL_06220 HKOGLL_06220 Morganella morganii S5 ppdD prepilin peptidase-dependent pilin
F4V73_RS08700 F4V73_RS08700 Morganella psychrotolerans ppdD prepilin peptidase-dependent pilin
PMI_RS10100 PMI_RS10100 Proteus mirabilis HI4320 ppdD prepilin peptidase-dependent pilin

Distribution of group_842 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_842 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_842

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_842.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ppdD 7

Product

# Product Occurence
1 prepilin peptidase-dependent pilin 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4969 7 NW Cell motility (N)
Extracellular structures (W)		 Type IV pilus assembly protein, major pilin PilA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02682 7 prepilin peptidase dependent protein D - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF07963 7 Prokaryotic N-terminal methylation motif

Annotations of the 46 SwissProt hits

Annotation Number of occurrences
Fimbrial protein 12
Fimbrial protein Q 1
Prepilin peptidase-dependent protein D 1
Prepilin peptidase-dependent protein D homolog 1
Probable minor fimbrial protein 2
Type II secretion system core protein G 7
Type IV major alpha-pilin 1
Type IV major fimbrial protein FimA 14
Type IV major pilin protein PilA 1
Type IV major pilin protein PilE 1
Type IV major pilin protein PilE1 3
Type IV pilus non-core minor pilin PilE 1
Type IV pilus subunit protein TapA 1

Protein length

Min length 139
Max length 147
Mean length (sd) 140.1 (3.0)
Median length 139.0

Protein length distribution