Orthogroup:group_835


Homologs in group_835

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04210 FBDBKF_04210 Morganella morganii S1 mscS Small-conductance mechanosensitive channel
EHELCC_05500 EHELCC_05500 Morganella morganii S2 mscS Small-conductance mechanosensitive channel
NLDBIP_05820 NLDBIP_05820 Morganella morganii S4 mscS Small-conductance mechanosensitive channel
LHKJJB_02700 LHKJJB_02700 Morganella morganii S3 mscS Small-conductance mechanosensitive channel
HKOGLL_06175 HKOGLL_06175 Morganella morganii S5 mscS Small-conductance mechanosensitive channel
F4V73_RS08655 F4V73_RS08655 Morganella psychrotolerans mscS small-conductance mechanosensitive channel MscS
PMI_RS10050 PMI_RS10050 Proteus mirabilis HI4320 mscS small-conductance mechanosensitive channel MscS

Distribution of group_835 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_835 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_835

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_835.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 mscS 7

Product

# Product Occurence
1 Small-conductance mechanosensitive channel 5
2 small-conductance mechanosensitive channel MscS 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0668 7 M Cell wall/membrane/envelope biogenesis (M) Small-conductance mechanosensitive channel

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03442 7 small conductance mechanosensitive channel - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00924 7 Mechanosensitive ion channel, beta-domain
PF05552 7 Mechanosensitive ion channel, conserved TM helix
PF21082 7 Mechanosensitive ion channel MscS, C-terminal
PF21088 7 Mechanosensitive ion channel, transmembrane helices 2/3

Annotations of the 29 SwissProt hits

Annotation Number of occurrences
Large-conductance mechanosensitive channel MscMJLR 1
Low conductance mechanosensitive channel YnaI 2
Mechanosensitive channel MscK 1
Mechanosensitive ion channel protein 1, mitochondrial 1
Mechanosensitive ion channel protein 2, chloroplastic 1
Mechanosensitive ion channel protein 9 1
Miniconductance mechanosensitive channel MscM 1
Small-conductance mechanosensitive channel 7
Small-conductance mechanosensitive channel MscMJ 1
Uncharacterized MscS family protein AF_1546 1
Uncharacterized MscS family protein BU452 1
Uncharacterized MscS family protein BUsg_437 1
Uncharacterized MscS family protein HI_0195.1 1
Uncharacterized MscS family protein HP_0415 1
Uncharacterized MscS family protein MJ0700 1
Uncharacterized MscS family protein YfkC 1
Uncharacterized MscS family protein YhdY 1
Uncharacterized MscS family protein YkuT 1
Uncharacterized MscS family protein aq_812 1
Uncharacterized MscS family protein bbp_402 1
Uncharacterized MscS family protein jhp_0969 1
Uncharacterized MscS family protein slr0639 1

Protein length

Unique protein length 286

Protein length distribution