Orthogroup:group_787


Homologs in group_787

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03685 FBDBKF_03685 Morganella morganii S1 ybdD DUF466 domain-containing protein
EHELCC_06850 EHELCC_06850 Morganella morganii S2 ybdD DUF466 domain-containing protein
NLDBIP_07175 NLDBIP_07175 Morganella morganii S4 ybdD DUF466 domain-containing protein
LHKJJB_06710 LHKJJB_06710 Morganella morganii S3 ybdD DUF466 domain-containing protein
HKOGLL_04220 HKOGLL_04220 Morganella morganii S5 ybdD DUF466 domain-containing protein
F4V73_RS11185 F4V73_RS11185 Morganella psychrotolerans - YbdD/YjiX family protein
PMI_RS00690 PMI_RS00690 Proteus mirabilis HI4320 - YbdD/YjiX family protein

Distribution of group_787 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_787 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_787

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_787.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ybdD 5
2 - 2

Product

# Product Occurence
1 DUF466 domain-containing protein 5
2 YbdD/YjiX family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2879 7 S Function unknown (S) Uncharacterized short protein YbdD, DUF466 family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04328 7 Selenoprotein, putative

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
Uncharacterized protein YbdD 3
Uncharacterized protein YjiX 4

Protein length

Min length 65
Max length 68
Mean length (sd) 65.4 (1.1)
Median length 65.0

Protein length distribution