Orthogroup:group_704


Homologs in group_704

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03045 FBDBKF_03045 Morganella morganii S1 lysR DNA-binding transcriptional regulator, LysR family
EHELCC_07490 EHELCC_07490 Morganella morganii S2 lysR DNA-binding transcriptional regulator, LysR family
NLDBIP_07815 NLDBIP_07815 Morganella morganii S4 lysR DNA-binding transcriptional regulator, LysR family
LHKJJB_07350 LHKJJB_07350 Morganella morganii S3 lysR DNA-binding transcriptional regulator, LysR family
HKOGLL_03580 HKOGLL_03580 Morganella morganii S5 lysR DNA-binding transcriptional regulator, LysR family
F4V73_RS11875 F4V73_RS11875 Morganella psychrotolerans - LysR family transcriptional regulator
PMI_RS18385 PMI_RS18385 Proteus mirabilis HI4320 - LysR family transcriptional regulator

Distribution of group_704 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_704 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_704

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_704.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lysR 5
2 - 2

Product

# Product Occurence
1 DNA-binding transcriptional regulator, LysR family 5
2 LysR family transcriptional regulator 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0583 7 K Transcription (K) DNA-binding transcriptional regulator, LysR family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00126 7 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 7 LysR substrate binding domain

Annotations of the 116 SwissProt hits

Annotation Number of occurrences
DNA-binding transcriptional dual regulator OxyR 1
HTH-type transcriptional activator AaeR 3
HTH-type transcriptional activator AllS 11
HTH-type transcriptional activator CmpR 3
HTH-type transcriptional activator IlvY 2
HTH-type transcriptional activator TtdR 5
HTH-type transcriptional regulator AbgR 1
HTH-type transcriptional regulator AceR 1
HTH-type transcriptional regulator BudR (Fragment) 1
HTH-type transcriptional regulator CbbR 5
HTH-type transcriptional regulator CfxR 1
HTH-type transcriptional regulator CitR 1
HTH-type transcriptional regulator ClcR 1
HTH-type transcriptional regulator CrgA 2
HTH-type transcriptional regulator CynR 2
HTH-type transcriptional regulator DmlR 1
HTH-type transcriptional regulator DsdC 1
HTH-type transcriptional regulator GltR 1
HTH-type transcriptional regulator IlvY 1
HTH-type transcriptional regulator MetR 7
HTH-type transcriptional regulator NmoR 1
HTH-type transcriptional regulator PcaQ 2
HTH-type transcriptional regulator PecT 1
HTH-type transcriptional regulator PerR 1
HTH-type transcriptional regulator TfdT 1
HTH-type transcriptional regulator TsaR 1
HTH-type transcriptional regulator YhaJ 1
HTH-type transcriptional regulator YofA 1
HTH-type transcriptional regulator YtlI 1
Hydrogen peroxide-inducible genes activator 5
Iron-regulated virulence regulatory protein IrgB 2
Multiple virulence factor regulator MvfR 1
Probable HTH-type transcriptional regulator LrrA 1
Probable HTH-type transcriptional regulator LtrA 1
Probable HTH-type transcriptional regulator YhaJ 1
Probable RuBisCO transcriptional regulator 15
Probable hydrogen peroxide-inducible genes activator 1
Probable hydrogen peroxide-inducible genes activator (Fragment) 1
Probable nitrogen assimilation transcriptional activator 2
RuBisCO operon transcriptional regulator 2
SDS degradation transcriptional activation protein 1
Transcriptional dual regulator GltC 1
Uncharacterized HTH-type transcriptional regulator YafC 1
Uncharacterized HTH-type transcriptional regulator YahB 1
Uncharacterized HTH-type transcriptional regulator YbdO 1
Uncharacterized HTH-type transcriptional regulator YbhD 1
Uncharacterized HTH-type transcriptional regulator YcaN 1
Uncharacterized HTH-type transcriptional regulator YcgK 1
Uncharacterized HTH-type transcriptional regulator YdcI 1
Uncharacterized HTH-type transcriptional regulator YdhB 2
Uncharacterized HTH-type transcriptional regulator YeeY 1
Uncharacterized HTH-type transcriptional regulator YeiE 3
Uncharacterized HTH-type transcriptional regulator YfiE 1
Uncharacterized HTH-type transcriptional regulator YhjC 1
Uncharacterized HTH-type transcriptional regulator YusT 1
Uncharacterized HTH-type transcriptional regulator YwqM 1
Uncharacterized HTH-type transcriptional regulator YxjO 1
Uncharacterized HTH-type transcriptional regulator YybE 1
Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region 1
Uncharacterized HTH-type transcriptional regulator y4mQ 1

Protein length

Min length 298
Max length 300
Mean length (sd) 298.3 (0.8)
Median length 298.0

Protein length distribution