Orthogroup:group_666


Homologs in group_666

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02375 FBDBKF_02375 Morganella morganii S1 ydgH DUF1471 domain-containing protein
EHELCC_02845 EHELCC_02845 Morganella morganii S2 ydgH DUF1471 domain-containing protein
NLDBIP_00615 NLDBIP_00615 Morganella morganii S4 ydgH DUF1471 domain-containing protein
LHKJJB_01420 LHKJJB_01420 Morganella morganii S3 ydgH DUF1471 domain-containing protein
HKOGLL_01460 HKOGLL_01460 Morganella morganii S5 ydgH DUF1471 domain-containing protein
F4V73_RS04760 F4V73_RS04760 Morganella psychrotolerans ydgH DUF1471 family protein YdgH
PMI_RS05785 PMI_RS05785 Proteus mirabilis HI4320 ydgH DUF1471 family protein YdgH

Distribution of group_666 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_666 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_666

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_666.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ydgH 7

Product

# Product Occurence
1 DUF1471 domain-containing protein 5
2 DUF1471 family protein YdgH 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3712 1 PT Inorganic ion transport and metabolism (P)
Signal transduction mechanisms (T)		 Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport

Pfam domain Annotation(s)

Domain ID Occurences Description
PF07338 7 YdgH/BhsA/McbA-like domain

Annotations of the 1 SwissProt hits

Annotation Number of occurrences
Protein YdgH 1

Protein length

Min length 317
Max length 318
Mean length (sd) 317.9 (0.4)
Median length 318.0

Protein length distribution