Orthogroup:group_648


Homologs in group_648

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02205 FBDBKF_02205 Morganella morganii S1 ridA Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family
EHELCC_02675 EHELCC_02675 Morganella morganii S2 ridA Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family
NLDBIP_00785 NLDBIP_00785 Morganella morganii S4 ridA Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family
LHKJJB_01250 LHKJJB_01250 Morganella morganii S3 ridA Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family
HKOGLL_01290 HKOGLL_01290 Morganella morganii S5 ridA Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family
F4V73_RS04575 F4V73_RS04575 Morganella psychrotolerans - RidA family protein
PMI_RS05605 PMI_RS05605 Proteus mirabilis HI4320 - RidA family protein

Distribution of group_648 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_648 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_648

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_648.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ridA 5
2 - 2

Product

# Product Occurence
1 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family 5
2 RidA family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0251 7 V Defense mechanisms (V) Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K09022 6 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01042 7 Endoribonuclease L-PSP

Annotations of the 100 SwissProt hits

Annotation Number of occurrences
2-aminomuconate deaminase 1
2-iminobutanoate/2-iminopropanoate deaminase 11
3-aminoacrylate deaminase RutC 62
Protein DfrA 1
Protein MMF1, mitochondrial 1
Protein mmf1, mitochondrial 1
Protein mmf2, mitochondrial 1
Putative reactive intermediate deaminase TdcF 3
Reactive Intermediate Deaminase A, chloroplastic 1
RutC family protein C23G10.2 1
RutC family protein HD_0322 1
RutC family protein HI_0719 1
RutC family protein HI_1627 1
RutC family protein HP_0944 1
RutC family protein PH0854 1
RutC family protein PM1466 1
RutC family protein PYRAB12510 1
RutC family protein STK_08110 1
RutC family protein UK114 1
RutC family protein YoaB 3
RutC family protein in leuC 5'region 1
RutC family protein in vnfA 5'region 1
RutC family protein jhp_0879 1
RutC family protein slr0709 1
RutC family protein y4sK 1

Protein length

Unique protein length 114

Protein length distribution