Orthogroup:group_645


Homologs in group_645

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02120 FBDBKF_02120 Morganella morganii S1 mdtI multidrug/spermidine efflux SMR transporter subunit MdtI
EHELCC_02590 EHELCC_02590 Morganella morganii S2 mdtI multidrug/spermidine efflux SMR transporter subunit MdtI
NLDBIP_00870 NLDBIP_00870 Morganella morganii S4 mdtI multidrug/spermidine efflux SMR transporter subunit MdtI
LHKJJB_01165 LHKJJB_01165 Morganella morganii S3 mdtI multidrug/spermidine efflux SMR transporter subunit MdtI
HKOGLL_01205 HKOGLL_01205 Morganella morganii S5 mdtI multidrug/spermidine efflux SMR transporter subunit MdtI
F4V73_RS04485 F4V73_RS04485 Morganella psychrotolerans mdtI multidrug/spermidine efflux SMR transporter subunit MdtI
PMI_RS05595 PMI_RS05595 Proteus mirabilis HI4320 mdtI multidrug/spermidine efflux SMR transporter subunit MdtI

Distribution of group_645 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_645 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_645

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_645.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 mdtI 7

Product

# Product Occurence
1 multidrug/spermidine efflux SMR transporter subunit MdtI 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2076 7 V Defense mechanisms (V) Multidrug transporter EmrE and related cation transporters

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11742 7 spermidine export protein MdtI - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00893 7 Small Multidrug Resistance protein

Annotations of the 155 SwissProt hits

Annotation Number of occurrences
Guanidinium exporter 14
Multidrug resistance protein EbrA 3
Multidrug resistance protein EbrB 3
Multidrug resistance protein Mmr 2
Multidrug resistance protein mmr 3
Multidrug transporter EmrE 1
Multidrug transporter PA4990 1
Nicotine metabolites export pump subunit NepA 1
Nicotine metabolites export pump subunit NepB 1
Putative ethidium bromide resistance protein 3
Quaternary ammonium compound-resistance protein QacC 2
Quaternary ammonium compound-resistance protein QacE 2
Quaternary ammonium compound-resistance protein QacF 1
Quaternary ammonium compound-resistance protein QacG 1
Quaternary ammonium compound-resistance protein QacH 1
Spermidine export protein MdtI 58
Spermidine export protein MdtJ 56
Uncharacterized membrane protein YvaE 1
Uncharacterized membrane protein YvdR 1

Protein length

Unique protein length 110

Protein length distribution